su: ignoring --preserve-environment, it's mutually exclusive with --login
Warning in warn_if_app_dir_is_package(appDir) :
  Loading R/ subdirectory for Shiny application, but this directory appears to contain an R package. Sourcing files in R/ may cause unexpected behavior. See `?loadSupport` for more details.
[ImmunoFusion] Installed package -> library(ImmunoFusion)
[2026-08-01 15:30:49] [INFO] Deploying ImmunoFusion on 0.0.0.0 : 40409

Listening on http://127.0.0.1:40409
[2026-08-01 15:30:55] [INFO] New user session started
[2026-08-01 15:30:55] [INFO] Module initialized: Home
[2026-08-01 15:30:55] [DEBUG] MODAL REOPEN: selected_cohort_groups = Hematologic, Bladder, Neuroblastoma, Breast, Brain, Colorectum, Endocrine, Esophageal, Head & Neck, Kidney, Liver, Lung, Ovary, Pancreas, Prostate, Sarcoma, Skin, Stomach, Testicle, Uterine, CellLine, Normal / Control, Others
Registered S3 method overwritten by 'bit64':
  method          from 
  print.bitstring tools
[2026-08-01 15:31:02] [INFO] Navigate to: Dist - Distribution
[2026-08-01 15:31:02] [INFO] Module initialized: Distribution
[2026-08-01 15:31:05] [INFO] Analysis: Distribution - Frequency
Warning in ggplot2::scale_y_continuous(trans = "log10", breaks = c(0, 1,  :
  log-10 transformation introduced infinite values.
Warning in ggplot2::scale_y_continuous(trans = "log10", breaks = c(0, 1,  :
  log-10 transformation introduced infinite values.
Warning in ggplot2::scale_y_continuous(trans = "log10", breaks = c(0, 1,  :
  log-10 transformation introduced infinite values.
[2026-08-01 15:31:20] [INFO] Navigate to: Home
[2026-08-01 15:31:21] [INFO] Navigate to: Data Summary
[2026-08-01 15:31:21] [INFO] Module initialized: Data Summary
[2026-08-01 15:31:22] [INFO] Navigate to: Fusion
[2026-08-01 15:31:22] [INFO] Module initialized: Fusion
[2026-08-01 15:31:22] [INFO] Gene selected: A1BG
[2026-08-01 15:31:28] [INFO] Navigate to: Dist - Distribution
[2026-08-01 15:31:28] [INFO] Navigate to: Cohort
[2026-08-01 15:31:28] [INFO] Module initialized: Cohort
[2026-08-01 15:31:30] [INFO] Cohort detail: PRJNA498500
[2026-08-01 17:56:14] [INFO] New user session started
[2026-08-01 17:56:14] [INFO] Module initialized: Home
[2026-08-01 17:56:14] [DEBUG] MODAL REOPEN: selected_cohort_groups = Hematologic, Bladder, Neuroblastoma, Breast, Brain, Colorectum, Endocrine, Esophageal, Head & Neck, Kidney, Liver, Lung, Ovary, Pancreas, Prostate, Sarcoma, Skin, Stomach, Testicle, Uterine, CellLine, Normal / Control, Others
[2026-08-01 23:46:56] [INFO] New user session started
[2026-08-01 23:46:56] [INFO] Module initialized: Home
[2026-08-01 23:46:56] [DEBUG] MODAL REOPEN: selected_cohort_groups = Hematologic, Bladder, Neuroblastoma, Breast, Brain, Colorectum, Endocrine, Esophageal, Head & Neck, Kidney, Liver, Lung, Ovary, Pancreas, Prostate, Sarcoma, Skin, Stomach, Testicle, Uterine, CellLine, Normal / Control, Others
[2026-08-02 02:58:13] [INFO] New user session started
[2026-08-02 02:58:14] [INFO] Module initialized: Home
[2026-08-02 02:58:14] [DEBUG] MODAL REOPEN: selected_cohort_groups = Hematologic, Bladder, Neuroblastoma, Breast, Brain, Colorectum, Endocrine, Esophageal, Head & Neck, Kidney, Liver, Lung, Ovary, Pancreas, Prostate, Sarcoma, Skin, Stomach, Testicle, Uterine, CellLine, Normal / Control, Others